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CERC Research Projects

Ecosystems

    Approaches to Interpreting Environmental Data (Contact: Robert Gale Environmental Chemistry)
Contaminant issues are highly visible to the public and have major national resource implications. A major need exists to better understand contaminant sources and the fate and effect of their chemical constituents. If the nation's resources are to be adequately protected, anticipatory research is needed to identify chemicals capable of causing environmental harm before a crisis is reached. Research efforts in this field of chemistry must advance to the point where it is possible not only to identify and quantity contamination but use the information to correlate and ideally predict the behavior and effects of the contamination. This research will strive to gain a fundamental understanding of contaminant interactions, sources, and potential harmful impacts of environmental contaminants. Among the contaminants that will be investigated are dioxin-like chemicals: polychlorinated biphenyls (PCBs), polyhalogenated dioxins, furans, and polyhalogenated diphenyl ethers. Studies to be conducted in cooperation with USFWS and the USGS-WRD will evaluate contaminants in fish and wildlife, waters, and sediments. Sites across the US will be studied: Hudson River, NY and the Passaic River in NJ to the Columbia River in Oregon. Each study's analytical contaminant data will be interpreted using a combination of essential biological information, environmental chemical models, and multivariate statistical analysis, and when needed, mathematical models will be developed that can be used to predict environmental contaminant behavior. This information will enable resource managers to transform research findings into sound policy decisions. The research will provide resource managers with interpreted trace organic contaminant information, e.g. analytical data that has been integrated with environmental models, toxicological and biological information.

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    Assessment of Avifauna in the Rio Grande Valley (Contact: Marc Woodin Texas Gulf Coast Field Research Station)
Texas is ornithologically the richest state in the nation, supporting more than 600 documented species. Southern Texas is particularly rich in avifauna because (1) birds from both eastern and western North America are funneled into this region during migration, (2) the Rio Grande acts as a travel corridor between the coast and distant inland areas to the west, and (3) many tropical species reach the extreme northern limits of their distributions in southern Texas. The U.S. Fish and Wildlife Service has been very active in establishing refuges in the lower reaches of the Rio Grande (an area about 95% converted to agriculture) to preserve remaining paths of habitat. Further upriver, however, the lands are entirely restricted by private ownership. These large, private ranches have not been open to scientists for many decades so our knowledge of the birds of this part of southern Texas in extremely sparse. Working directly with ranchers will be essential to an improved understanding of distributions, abundances, and communities of birds in this ornithologically very dynamic, yet largely unexplored, portion of southern Texas. Surveys of different habitat types on the Galvan Ranch (Ed Rachal Foundation), northwest of Laredo, will be conducted. These surveys will yield data to demonstrate the breeding bird species present at pond and riparian habitats on the Galvan. This information is vital to determine the extent of the breeding distributions of tropical species, some of which are extremely rare in the U.S., on private lands along the Rio Grande northwest of Laredo. The objective of this study is to conduct surveys of avifauna in Rio Grande Valley of southern Texas in order to determine the avian diversity of the area.

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    Determination of Toxic Elemental Constituents in Samples from Field and Laboratory Studies to Assess Bioavailability and Evaluate Ecosystem Health (Contact: Tom May Environmental Chemistry)
Elemental contaminants directly from anthropogenic sources and from natural sources disturbed by anthropogenic activities are an ever-present threat to biological resources and ecosystem health. Examples of such contamination are well documented and are widespread: metal-laden acid mine drainage from abandoned mine lands; selenium in subsurface agricultural irrigation drainage; historic movement of mine tailings in watersheds; aerial mercury contamination of lakes and streams; electroplating plant outflows; urban dust exposure; coal-fired power plant emissions. In many cases the elemental contaminants, once reaching the aquatic ecosystem, are processed up the biological food chain, undergoing bioaccumulation and becoming a threat to bird and terrestrial wildlife populations and in some cases, human health. The need then focuses on studies that will assess the biological/human impacts of such contaminants. Research studies will be conducted that will help evaluate the effects of metal contaminants on biological/human resources, with a primary focus on the effects of irrigation return flows on biological resources in receiving waters. Studies include: potential bioaccumulation of selenium, determining biological health effects from the bioaccumulation of selenium in endangered Colorado River pikeminnow, and the biological health effects from the bioaccumulation of selenium in invertebrates and fish inhabiting the Solomon River Basin in Kansas and the Republican River Basin in Nebraska. In addition, the effects of mining waste, studying the bioaccumulation of mercury and selenium in benthic invertebrates inhabiting Lake Sharpe, SD, which has historically received mining waste from active gold mining in the Black Hills, SD.

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    Ecological Risk Assessment of Herbicides and Other Non-Point Source Pollutants in Freshwater Aquatic Ecosystems (Contact: Jim Fairchild Ecology)
Non-point source pollution is the most pervasive water quality threat to aquatic resources in the United States. It is degrading numerous wetlands, streams, lakes, and estuaries which are important habitats for endangered species and anadromous fishes. Both direct (toxic) and indirect (alteration of habitat) effects of non-point source pollution can occur. However, non-point source pollutants cannot be regulated using existing water quality criteria because multiple causes of degradation (pesticides, nutrients, and sediments) occur over broad temporal and spatial scales and are difficult to identify and control. Information is needed to support identification, assessment, remediation, and prevention of non-point source pollution effects on aquatic resources. To develop non-point source pollution assessment techniques, cooperative research between the USGS, USDA, USEPA, and USFWS will be conducted at two Management Systems Evaluation Areas (MSEA), one in Iowa (Walnut Creek Watershed) and one in Missouri (Goodwater Creek Watershed) . Laboratory acute toxicity tests will be used to determine the potential effects of various farming systems on aquatic organisms. Water will be collected following runoff events at MSEA sites. Toxicity tests with four aquatic test species will be conducted: fathead minnow (Pimephales promelas), a cladoceran (Ceriodaphnia dubia), a vascular plant (Lemna minor), and algae (Selenastrum capricornutum). Results will be used to identify primary stressors affecting these watersheds and information gaps identified. Laboratory and experimental ecosystem studies, and ecological risk assessments will be conducted by comparing toxicological responses to measured pesticide concentrations. Results will be used to rank the relative hazard of pesticides to other potential water quality factors such as nutrients, sedimentation, temperature, and dissolved oxygen. USDA and the EPA will use this information to develop alternative farming systems and water quality programs that will reduce the effects of non-point source pollution.

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    Fate and Effects of Nitrogen in Experimental Aquatic Ecosystems (Contact: Jim Fairchild Ecology)
This research will provide information concerning the fate and dynamics of nitrate and phosphate in macrophyte-dominated aquatic systems. To include: 1) identification of major sources and sinks of nutrients in the experimental systems; 2) rates of nutrient uptake and assimilation; 3) optimum ratios of nitrogen and phosphorus for macrophyte and algal productivity; and 4) direct and indirect effects of these nutrients on macrophytes, algae, microinvertebrates, and water quality. The results can be used by land managers to determine strategies for nutrient retention in riparian and wetland systems and will contribute to the basic scientific literature concerning macrophyte-nutrient interactions.

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    Laboratory and Pilot Demonstration of Semipermeable Membrane Device (SPMDs) as Passive Samplers of Polyaromatic Hydrocarbon (PAH) Priority Pollutants (Contact: Carl Orazio Environmental Chemistry)
This research project centers on the development and application of SPMD technology to determine the occurrence of PAH contamination in selected aquatic and terrestrial environments. This research will provide critical data for applying SPMD technology to PAH pollution, an important class of contaminants associated with energy production and industrial activity. The PAHs typically do not bioconcentrate in sentinel organisms but do elicit a broad spectrum of toxicological responses. As such they are of widespread interest and are problematic to fish and wildlife resource managers. The SPMD laboratory studies (both static and flow- through exposures) will provide kinetic data required to generate models for estimating ambient water concentrations of PAHs, a task rarely accomplished and only with great difficulty. Use of both laboratory-derived and field application data will be required to validate the SPMD approach for assessing the presence and ecological relevance of PAH pollutions. The results of this work will be a template for extending the SPMD technology to a broad spectrum of environmental problems relating to organic contaminants or habitat quality. The American Petroleum Institute (API) and its member companies are cooperators in this research effort.

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    Land Use and Climate Effects on the Geomorphology of Ozark Highlands Streams (Contact: Robb Jacobson River Studies)
Long reaches of almost all Ozark Highlands streams exhibit substantial gravel aggradation and resultant channel instability. Recent aggradation appears to be much more severe than prehistoric episodes represented in the stratigraphic record. Whereas climate changes have been used to explain pre-historic episodes, the most recent episode has been explained commonly by adverse land-use practices of the 19th and 20th centuries. Gravel aggradation has caused rapid shifting of stream channels and extensive changes in channel morphology. Long-term residents of the Ozarks attest that pools have been filling up and the fisheries resource has been degraded over the last 50-80 years. Thus, gravel aggradation appears to be a significant determinant of aquatic habitat availability. Any changes in the aquatic ecosystems of Ozark Highlands streams that would result from global-scale changes would occur within the context of the recent, local disturbance history of these stream channels and their contributing basins. Although recent disturbance is evident, it is not known how it compares to natural disturbance episodes, whether the fluvial system is recovering to its natural state, whether aggradation and instability are increasing, or whether the system has equilibrated to an alternative state governed by present-day hydrology and sediment supply. This proposal addresses the aggradational history of Ozark Highlands streams over time intervals of years to thousands of years. The proposed study is designed to (1) determine how Ozark Highlands stream channels achieved their present state of instability; assess how present-day instability relates to natural disturbance rates and magnitudes; identify contributing processes; and assess temporal trends; (2) quantify effects of channel disturbance on channel morphology determinants of physical aquatic habitat; and (3) develop a predictive model to assess how streams and basins will react to potential future global and local changes. The results of the study will define the state of stability or instability of the physical hydrologic system. Evaluation of stability or trends in the physical system is essential to interpretation of changes in aquatic ecological structure and function. Evaluation of land-use induced response of stream channels is also of interest for correlation to terrestrial ecosystem histories. The proposed research will determine how Ozark Highlands stream channels achieved their present state of instability.

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    Lower Missouri River Ecosystem Initiative (Contact: River Studies)
The flood of 1993 in the lower Missouri River basin was one of the most devastating in the nations history which brought national attention. The aftermath of the flood compelled an evaluation of the effectiveness and cost of current flood and floodplain ecosystems and their tributary watersheds and wetlands. It has also forced the need to reconsider the best long-term strategy to ensure that the assets of the floodplain are used to the fullest extent possible in ways that reflect current environmental and economic values. This includes reexamining the collective efforts of federal, state, and local governments; individuals; and the private sector in floodplain management that might include setting back levees, acquiring and restoring wetlands, and purchasing floodplain easements from farmers. This project provides the USGS-BRD a unique opportunity for significant cooperation with other intergovernmental and state agencies in assessing potential restoration of natural functions and values of the Missouri River ecosystem. CERC will assume primary responsibility on research coordination, procurement, and management of the biological portion of the SAST database of the lower Missouri River. This includes data consolidation, state-of-the-art visualization (GIS), information dissemination, identifying informational gaps, and conducting high-quality research on the lower Missouri River. CERC will also identify existing players, data and activities related to the Missouri River. The existing data will be cataloged and synthesized into what is currently known to aid in identifying information gaps. CERC will provide a program with high-quality scientific and technical support to federal, state, and private partners in a timely and cost-effective manner. A repository for available biological/ecological data will be established to distribute biological information from multiple sources that will help produce and transfer scientific information on the Missouri River. (CERC Final Report--Title Page  Report)

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    Lower Rio Grande Ecosystem Initiative (Contact: Diana Papoulias Biochemistry/Physiology)
The U.S. Department of the Interior (DOI) has significant interests in the lower Rio Grande/Rio Bravo Basin. The DOI owns or manages approximately 37% of the U.S. lands along the U.S./Mexico border, including Big Bend National Park and the Lower Rio Grande Valley National Wildlife Refuge in the Rio Grande Basin. These and other federal and state lands are part of a diverse and sensitive ecosystem that is vulnerable to anthropogenic pressures. The Rio Grande and its major tributary, the Rio Conchos, are considered to be among North America's most endangered river systems due to extensive degradation in water quality and habitat from the Rio Grande's headwaters in the San Juan mountains of southern Colorado to its terminus 2000 miles downstream at the Gulf of Mexico. The lower Rio Grande Basin suffers numerous pollution problems, including hazardous waste dumps, municipal and industrial effluent, irrigation return flows, and mining runoff. The pollution problems are largely the result of socioeconomic factors, including population growth and rapidly expanding industrial development. Further demographic change and expanded commercial development along the Rio Grande are expected in the foreseeable future. Despite compelling evidence of environmental degradation, little is understood about the specific sources and ecological relevance of the myriad pollutants and anthropogenic pressures affecting the river system. Research will be conducted to determine the extent to which anthropogenic influence and pollution have contributed to environmental degradation in selected reaches of the lower Rio Grande River. This will be accomplished by conducting a series of research tasks designed to provide an incremental understanding of the various components of the relationship between contaminant presence, anthropogenic pressures, and the health of fish and wildlife communities that are dependent upon the river system. These tasks include (1) evaluating contaminant effects on fish in the Rio Grande main-stem, (2) identifying ecological and contaminant issues in resacas (oxbows) in the Lower Rio Grande Valley of the U.S. and Mexico, (3) developing a bibliographic database of natural resources of the Rio Grande between Elephant Butte and the Gulf of Mexico, (4) examining peregrine falcon reproduction adjacent to and within Big Bend National Park, (5) providing technical assistance in the creation of a GIS database of Mexican lands adjacent to the lower Rio Grande, and (6) establishing an Internet site to detail activities along the lower Rio Grande and provide information to researchers, managers, decision makers, and citizens involved in environmental issues along the international border.

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    Population and Community-Level Bioindicators of Contaminant Stress in Aquatic Ecosystems (Contact: Jim Fairchild Ecology)
Single species laboratory toxicity tests are used within the Toxic Substances Control Act (TSCA) and the Federal Insecticide, Fungicide, and Rodenticide Act (FIFRA), to estimate contaminant concentrations that are protective of non-target aquatic species. However, in spite of these regulations contaminant impacts still occur. Single-species laboratory tests are not always predictive of contaminant effects for several reasons: (1) no species is universally sensitive to all contaminants; (2) exposure to contaminants is frequently episodic and difficult to predict; and (3) aquatic organisms are frequently exposed to mixtures of contaminants. Biomonitoring of population and community structure in aquatic ecosystems may be a more direct approach for assessing the cumulative effects of contaminants. Populations and communities can be useful indicators of contaminant stress for several reasons: (1) they complete their entire life cycle in water, thus serving as continuous bioindicators which can integrate the effects of widely fluctuating contaminant exposures; (2) assessment of population and community structure directly measures the affected resource, thus extrapolations for interspecies sensitivities, mixtures, and pulsed exposures are not needed; and (3) these assessments are easily understood by managers, regulators, and the general public. This research will develop guidelines for using population and community structure to detect effects of aquatic contaminant. Specific contaminant will include insecticides, herbicides, metals, industrial chemicals, and acid-mine drainage. Information derived will be used to develop guidelines concerning sampling equipment, sampling design, data collection, index selection, and data analysis.

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    River Corridor Habitat Dynamics, Lower Missouri River (Contact: Robb Jacobson River Studies)
Regulation, bank stabilization, and navigation structures on the lower Missouri River have severely altered the hydrologic and physical characteristics of the channel and flood plain (that is, the riverine zone). Reservoir regulation for navigation, flood control, power generation, and other purposes has changed the magnitude, frequency, timing, and duration of high- and low-flow periods. Navigation structures and bank revetments have narrowed and deepened the channel. Revetments and levees have confined the channel and disconnected it from the floodplain. As a result, the lower Missouri River has changed from a dynamic, braided river to a swiftly flowing, single-thread meandering river. Declines of many riverine species have been attributed to these substantial habitat changes. However, little is known about the cause/effect relations linking management, habitat, and biotic responses. Efforts to rehabilitate the Missouri River depend on developing quantitative understanding of these links: how can changes in release schedules and channel geometry affect availability of habitat? And if habitat is provided, do the native riverine biota respond? Because hydrodynamics and geomorphic changes are the primary factors responsible for structuring the riverine zone, the links must be established at a scale at which these factors can be quantified. This project addresses habitat dynamics in the lower Missouri River from Gavins Point dam at Yankton, SD, to St. Louis, MO. Hydrologic and physical characteristics of the river vary regionally with changes in physiography, tributary influences, and variations in channelization. Within this variation, representative reaches can be identified and targeted for intensive, integrated study. Intensive study requires developing of comprehensive physical characterization, a hydraulic model for inventorying the distribution of water, and focused biological sampling to demonstrate biological links. The increased understanding developed by intensive studies also provides information on what factors can be generalized and simplified to measure riverine ecosystem integrity. The hierarchical classification and sampling strategy include characterizing of all of the potential stressors that might affect intensively studied sites. Comparison of these potential stressors with detailed information on riverine ecosystem processes will allow for developing and testing large-river ecosystem indicators. The first site to be investigated under this project will be Lisbon Bottom (River Mile 213- 219), a high-sinuosity reach in the Grand-Osage segment of the lower Missouri River. Lisbon Bottom is representative of many high-sinuosity portions of the lower Missouri River and has the advantage of proximity to long-term stream gages, proximity to CERC, and federal ownership in the U.S. Fish and Wildlife Refuge system. The flood of 1993 breached agricultural levees around Lisbon Bottom, thereby reestablishing a dynamic connection to the Missouri River. In addition, the flood of 1996 cut a secondary chute across the bottom. Quantified comparison of the physical characteristics of the main channel and the chute will be used to evaluate the value of secondary habitats relative to the main channel. Although still affected by flow regulation and the requirement to maintain navigation in the main channel, Lisbon Bottom presents the opportunity to study ecosystem processes and dynamic geomorphology in a setting that more closely mimics the natural riverine system than any other site on the lower Missouri River. Lisbon Bottom will serve as an intensive study pilot for developing approaches and protocols. The study results will be directly applicable to cost/benefit analysis of habitat rehabilitation studies. The purpose of this research is to define the links from river management to habitat and biotic responses. Intensive, integrated studies at the reach scale will provide improved understanding of how hydrologic characteristics and riverine geomorphic characteristics determine habitat quantity and quality and how biota use the habitat. This level of information is essential for optimizing wildlife benefits of reservoir release schedules and for designing rehabilitation projects.

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    Western Reservoir Water Quality Study - Elephant Butte Reservoir, Angostura Reservoir, San Pedro River (Contact: Duane Chapman River Studies)
Increasingly, multiple stressors are impacting the limited water resources of the Midwestern and Western United States. These stressors range from increased nutrient loadings to point and non-point source inputs of a multitude of environmental contaminants. Demonstrated impacts of stressors have been identified in Elephant Butte and Caballo Reservoirs, New Mexico, Angostura Reservoir, South Dakota, and San Pedro River, Arizona. A multi-disciplinary approach for defining the presence and significance of the multiple stressors affecting reservoirs will be employed to provide information to resource agencies as an integral part of the management decision process. Study 1: Elephant Butte and Caballo Reservoirs provide long term storage of water from the Rio Grande for use in Texas and Mexico. These reservoirs comprise the major storage features of the Rio Grande Project. Caballo is a winter storage reservoir to retain power plant releases from Elephant Butte Dam. Elephant Butte can have oligotrophic characteristics over much of the year, but show several trophic states depending on the actual volume stored, inflow, season, and other conditions. Eutrophic conditions may also be manifest in Elephant Butte at least seasonally. One of the major problems that develops in Elephant Butte especially during the summer season is release of hydrogen sulfide to the atmosphere from the tailrace. The odor is sufficient to be a concern to Reclamation employees and the public in the vicinity. The hydrogen sulfide problem has been reported to be worse during years with the greatest storage contents. This coincides with greater overall thermal stratification for a longer period of time. The actual source of the hydrogen sulfide remains uncertain. Likely possibilities include point-source seepage into the upper reservoir and generation in the hypolimnion. Additional concerns related to Elephant Butte Reservoir include the presence of mercury in the environmental samples and the potential for extensive algal blooms. The focus of the current year's effort will be on the hydrogen sulfide issue, with consideration of the mercury and algal issues as priorities for out-year funding. Study 2: The Angostura Unit, is located at the southeastern edge of the Black Hills in southwest South Dakota and consists of Angostura Dam, Reservoir, land, and the associated irrigation distribution system. The Unit provides multipurpose benefits including irrigation, flood control, fish and wildlife conservation, recreation, and sediment control. The Dam, which was completed in 1949, impounds the Cheyenne River. The Reservoir extends 27 km in length along the Cheyenne River and 12 km along Horsehead Creek, a major tributary. During the last several years, there has been increasing concern about the quality of irrigation drainage and its potential harmful effects on human health, fish and wildlife. This study will identify data gaps and provide recommendations to achieve a fuller understanding of the response of the biological community to environmental conditions within the study area. Study 3: The Lower San Pedro River is an important aquatic resource that may be affected by agricultural, mining, and water treatment activities. Surface run-off from irrigated agricultural fields and diverted effluent contribute to soil moisture and creation of suitable habitat at several locations where the federally endangered Southwestern willow flycatcher is breeding. In addition, mining activities may impact the resource where these birds breed. This study will include a field component to determine levels of selected inorganic and organic contaminants at reference and potentially impacted sites within the San Pedro River riparian zone. A laboratory component will provide a synthesis document of available resource information in a report that identifies data needs and makes recommendations for a 5 year comprehensive study plan to achieve a fuller understanding of the response of the biological community to environmental conditions within the study area. Ecologically relevant decision support systems will be developed for use in evaluating management practices in three reservoirs of the Western United States. These decision support systems will also be useful for determining the effects of changing resource management alternatives on limited water resources. The completion of this work will provide DOI Agencies, specifically but not exclusively, USBR, with information and recommendations needed to address water quality impact on biota associated with a number of reservoirs and water systems identified by USBR.

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